Fitness data for PS417_11040 in Pseudomonas simiae WCS417

aldose epimerase
SEED: L-arabinose-specific 1-epimerase (mutarotase)
KEGG: aldose 1-epimerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Xylose (C) -0.9 -6.0 compare
carbon source D-Glucosamine Hydrochloride (C) -0.7 -2.9 compare
carbon source L-Valine (C) -0.7 -2.0 compare
carbon source D-Xylose (C) -0.6 -3.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.8 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.6 -3.0 compare
carbon source D-Glucosamine Hydrochloride (C) -0.6 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.4 compare
phage JP1 MOI 1 -0.5 -1.5 compare
phage P. simiae OR Antrim MOI 1 -0.4 -2.0 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.4 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.5 +1.8 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.6 +2.3 compare
root root sample 6; outgrowth in LB +0.6 +2.4 compare
carbon source D-Glucose-6-Phosphate (C) +0.9 +4.0 compare