Fitness data for PS417_10995 in Pseudomonas simiae WCS417

GntR family transcriptional regulator
SEED: Transcriptional regulator of the arabinose operon in Shewanella, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.5 -2.4 compare
solid stress Fraxetin 3 mM; solid stress -2.5 -2.9 compare
carbon source Gly-Glu (C) -2.4 -4.2 compare
stress methylglyoxal 0.032 vol% -1.9 -2.0 compare
carbon source Gly-Glu (C) -1.9 -3.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.8 -1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 -2.8 compare
phage JP1 MOI 0.1 -1.7 -2.5 compare
carbon source L-Valine (C) -1.7 -2.0 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.7 -2.4 compare
soil soil sample 6; outgrowth in LB +1.5 +4.5 compare
root root sample 6; outgrowth in LB +1.6 +4.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.6 +2.1 compare
soil soil sample 3; outgrowth in LB +1.7 +3.1 compare
soil soil sample 2; outgrowth in LB +1.8 +4.3 compare
carbon source L-Arabinose (C) +1.9 +8.8 compare
soil soil sample 8; outgrowth in LB +2.0 +5.3 compare
carbon source L-Arabinose (C) +2.0 +7.1 compare
carbon source D-Xylose (C) +2.1 +5.4 compare
carbon source D-Xylose (C) +2.3 +9.7 compare