Fitness data for PS417_10910 in Pseudomonas simiae WCS417

FAD-dependent oxidoreductase
SEED: Sarcosine oxidase beta subunit (EC 1.5.3.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
seeds Growth on radish seeds for 72 hours -1.6 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -1.2 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -2.6 compare
soil soil sample 3; outgrowth in LB -1.1 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.1 -1.4 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.9 -3.0 compare
liquid stress Fraxetin 2 mM; liquid stress -0.9 -2.1 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +0.9 +2.1 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.9 +1.9 compare
carbon source 2-Deoxy-D-Ribose (C) +0.9 +3.2 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.9 +2.8 compare
carbon source 2-Deoxy-D-Ribose (C) +0.9 +2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +2.6 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x +1.0 +2.1 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +1.0 +2.5 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.0 +3.0 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x +1.0 +3.3 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.0 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +1.4 compare