Fitness data for PS417_01075 in Pseudomonas simiae WCS417

N5,N10-methylene tetrahydromethanopterin reductase
SEED: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil soil sample 4; outgrowth in LB -0.9 -3.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.8 compare
soil soil sample 5; outgrowth in LB -0.7 -2.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.7 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.6 compare
soil soil sample 6; outgrowth in LB -0.6 -2.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.6 -2.4 compare
stress Gentamicin 0.008 mg/ml -0.6 -3.2 compare
soil soil sample 8; outgrowth in LB -0.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.4 compare
soil soil sample 3; outgrowth in LB -0.5 -1.7 compare
stress methylglyoxal 0.032 vol% -0.5 -1.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.2 compare
carbon source L-Valine (C) -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.4 +1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.8 compare