Fitness data for PS417_01040 in Pseudomonas simiae WCS417

RND transporter
SEED: Efflux transporter, RND family, MFP subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -2.6 compare
stress 6-methoxy-2(3H)-benzoxazolone 2.5 mM -0.6 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.7 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.5 -2.2 compare
carbon source L-Valine (C) -0.5 -1.3 compare
phage P. simiae Grant Run MOI 0.1 -0.5 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.9 compare
solid stress Fraxetin 2 mM; solid stress +0.5 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.3 compare
soil soil sample 7; outgrowth in LB +0.5 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.5 compare
phage P. simiae Grant Run MOI 10 +0.5 +1.6 compare
phage JP1 MOI 1 +0.5 +1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.7 +3.0 compare