Fitness data for PS417_10425 in Pseudomonas simiae WCS417

hypothetical protein
SEED: Virulence factor mviM
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
stress methylglyoxal 0.032 vol% -1.9 -1.0 compare
root root sample 6; outgrowth in LB -1.5 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.5 -0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -1.3 compare
stress Doxycycline hyclate 0.001 mg/ml -1.4 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.4 -1.6 compare
phage Wcs_0.1 -1.4 -1.6 compare
carbon source Gly-Glu (C) -1.4 -2.5 compare
carbon source Carbon source L-Citrulline 10 mM -1.3 -2.1 compare
liquid stress Scopoletin 3 mM; liquid stress -1.2 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.2 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -0.9 compare
carbon source Carbon source D-Mannitol 10 mM -1.1 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.7 compare
phage JP1 MOI 1 +1.1 +1.1 compare
seeds Growth on radish seeds for 72 hours +1.4 +1.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.5 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.7 +1.3 compare