Fitness data for PS417_10390 in Pseudomonas simiae WCS417

RNA polymerase subunit sigma24
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.9 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -1.9 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -1.5 -3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -1.8 compare
root root sample 6; outgrowth in LB -1.3 -0.9 compare
seeds Growth on radish seeds for 24 hours -1.2 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -2.0 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.2 -1.6 compare
carbon source 2-Deoxy-D-Ribose (C) -1.2 -2.0 compare
soil soil sample 7; outgrowth in LB -1.1 -1.3 compare
phage P. simiae ORA MOI 10 -1.1 -1.5 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -1.0 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -1.7 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.9 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.2 compare
carbon source Gly-Glu (C) +0.9 +3.0 compare
carbon source L-Valine (C) +1.0 +1.8 compare
carbon source L-Arabinose (C) +1.0 +3.8 compare
soil soil sample 3; outgrowth in LB +1.1 +2.0 compare