Fitness data for PS417_09780 in Pseudomonas simiae WCS417

type IV secretion protein Rhs

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.9 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -2.3 compare
soil soil sample 4; outgrowth in LB -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.2 compare
carbon source L-Valine (C) -0.4 -1.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.2 compare
supernatant control Vogels_fungal_media 0.1X -0.3 -2.0 compare
nophagecontrol TIme6-nophage -0.3 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.3 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.3 -2.0 compare
phage P. simiae OR1 MOI 0.1 -0.3 -1.4 compare
carbon source L-Valine (C) -0.3 -1.3 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.3 -1.7 compare
stress Polymyxin B sulfate 0.006 mg/ml -0.3 -2.0 compare
motility inner cut, LB soft agar motility assay -0.3 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.8 compare