Fitness data for PS417_09740 in Pseudomonas simiae WCS417

RNA polymerase subunit sigma-24
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage P. simiae OR1 MOI 0.1 -1.3 -1.7 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.3 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -2.0 compare
soil soil sample 3; outgrowth in LB -0.8 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -2.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.8 -1.1 compare
liquid stress Scopoletin 3 mM; liquid stress -0.8 -1.9 compare
soil soil sample 4; outgrowth in LB -0.7 -1.6 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.7 +3.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +0.9 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM +0.8 +2.8 compare
solid stress 80% Methanol 2 mM; solid stress +0.8 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.6 compare
stress Choline chloride 300 mM +0.9 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.9 +3.6 compare
root root sample 6; outgrowth in LB +1.2 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +0.9 compare