Fitness data for PS417_09625 in Pseudomonas simiae WCS417

sugar ABC transporter substrate-binding protein
SEED: Extracellular Matrix protein PslD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
solid stress 80% Methanol 3 mM; solid stress -2.2 -3.3 compare
supernatant control Vogels_fungal_media 0.1X -2.2 -2.2 compare
solid stress 80% Methanol 2 mM; solid stress -1.9 -4.4 compare
solid stress Fraxetin 3 mM; solid stress -1.6 -2.7 compare
solid stress 80% Methanol 2 mM; solid stress -1.6 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -2.2 compare
stress R2A with Fusaric 120 ug/mL -1.3 -3.6 compare
solid stress Fraxetin 2 mM; solid stress -1.2 -2.4 compare
solid stress 80% Methanol 0.5 mM; solid stress -1.2 -2.1 compare
solid stress 80% Methanol 2 mM; solid stress -1.2 -2.5 compare
liquid stress 80% Methanol 3 mM; liquid stress -1.2 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.2 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.3 +2.4 compare
seeds Growth on radish seeds for 72 hours +1.4 +2.0 compare
phage JP1 MOI 1 +1.4 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.4 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.6 +2.9 compare
soil soil sample 4; outgrowth in LB +1.7 +6.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +3.0 +2.1 compare