Fitness data for PS417_09565 in Pseudomonas simiae WCS417

DNA polymerase II
SEED: DNA polymerase II (EC 2.7.7.7)
KEGG: DNA polymerase II

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Cisplatin 0.01 mg/ml -1.1 -5.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.7 compare
carbon source L-Valine (C) -0.3 -1.4 compare
motility inner cut, LB soft agar motility assay -0.3 -1.7 compare
seeds Growth on radish seeds for 72 hours -0.3 -1.5 compare
phage P. simiae Grant Run MOI 10 +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +2.1 compare
no stress control TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2 +0.3 +2.2 compare
soil soil sample 5; outgrowth in LB +0.3 +0.9 compare
phage P. simiae Grant Run MOI 0.1 +0.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.0 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.3 +1.3 compare
phage JP1 MOI 0.1 +0.3 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.4 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.4 compare
root root sample 6; outgrowth in LB +0.5 +1.3 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.7 +1.6 compare