Fitness data for PS417_00930 in Pseudomonas simiae WCS417

ABC transporter permease
SEED: Sulfate and thiosulfate binding protein CysP
KEGG: sulfate transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.2 compare
phage JP1 MOI 10 -0.6 -2.1 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.6 -2.7 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.6 -1.7 compare
carbon source RCH2_defined_glucose with MS_media 1x -0.5 -2.8 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.5 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.8 compare
phage P. simiae OR Antrim MOI 10 -0.5 -1.8 compare
phage Wcs_0.1 -0.4 -1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.4 -1.9 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.4 -2.4 compare
stress Spectinomycin 0.4 mg/ml -0.4 -2.0 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.4 -1.8 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.4 -2.6 compare
liquid stress Scopoletin 3 mM; liquid stress +0.4 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.4 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.9 compare