Fitness data for PS417_09215 in Pseudomonas simiae WCS417

MFS transporter
SEED: Permeases of the major facilitator superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage JP1 MOI 1 -0.8 -2.7 compare
stress Doxycycline hyclate 0.001 mg/ml -0.7 -2.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -1.8 compare
phage P. simiae OR Antrim MOI 10 -0.6 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -3.2 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.2 compare
phage P. simiae ORA MOI 0.1 -0.5 -1.7 compare
phage P. simiae OR Antrim MOI 0.1 -0.5 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.4 compare
liquid stress Fraxetin 3 mM; liquid stress +0.5 +2.3 compare
seeds Growth on radish seeds for 72 hours +0.6 +1.0 compare
stress R2A with Fusaric 120 ug/mL +0.6 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.2 compare
stress methylglyoxal 0.032 vol% +0.7 +2.4 compare
soil soil sample 7; outgrowth in LB +0.8 +2.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.8 +3.1 compare
soil soil sample 3; outgrowth in LB +0.8 +2.6 compare
root root sample 6; outgrowth in LB +0.9 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +2.6 compare