Fitness data for PS417_09190 in Pseudomonas simiae WCS417

cysteine protease
SEED: Transglutaminase-like enzymes, putative cysteine proteases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -3.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.1 compare
stress methylglyoxal 0.032 vol% -0.4 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -1.4 compare
liquid stress Fraxetin 3 mM; liquid stress -0.3 -2.2 compare
phage JP1 MOI 1 +0.4 +1.7 compare
carbon source L-Histidine (C) +0.4 +2.6 compare
carbon source Carbon source L-Ornithine 5 mM +0.4 +2.4 compare
phage JP1 MOI 1 +0.4 +1.6 compare
carbon source octanoate (C) +0.5 +2.8 compare
soil soil sample 2; outgrowth in LB +0.5 +2.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +1.3 compare
phage JP1 MOI 0.1 +0.5 +2.2 compare
root root sample 6; outgrowth in LB +0.5 +1.5 compare
motility inner cut, LB soft agar motility assay +0.6 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.0 compare
soil soil sample 6; outgrowth in LB +0.6 +2.6 compare