Fitness data for PS417_09145 in Pseudomonas simiae WCS417

TonB-dependent receptor
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source L-Valine (C) -0.7 -3.5 compare
root root sample 6; outgrowth in LB -0.4 -2.2 compare
phage P. simiae ORA MOI 10 -0.4 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.8 compare
phage JP1 MOI 10 -0.4 -2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.3 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.8 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.3 -1.4 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.3 -1.7 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1 -0.2 -1.8 compare
phage P. simiae OR Antrim MOI 0.1 -0.2 -1.6 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.2 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +1.0 compare
stress methylglyoxal 0.032 vol% +0.3 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +2.1 compare
stress Thallium(I) acetate 0.0625 mg/ml +0.3 +1.9 compare
stress Gentamicin 0.008 mg/ml +0.3 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.7 compare