Fitness data for PS417_00900 in Pseudomonas simiae WCS417

4-aminobutyrate aminotransferase
SEED: 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
KEGG: 5-aminovalerate aminotransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.3 -2.3 compare
carbon source L-Valine (C) -3.8 -2.5 compare
carbon source L-Valine (C) -3.7 -2.8 compare
stress L-Lysine 60 mM -2.2 -3.6 compare
carbon source Carbon source L-Ornithine 5 mM -1.9 -2.4 compare
solid stress Fraxetin 3 mM; solid stress -1.8 -2.4 compare
liquid stress Fraxetin 2 mM; liquid stress -1.6 -2.4 compare
phage Wcs_1 -1.5 -1.5 compare
phage P. simiae OR Antrim MOI 1 -1.5 -1.9 compare
phage P. simiae Grant Run MOI 10 -1.4 -2.1 compare
seeds Growth on radish seeds for 72 hours -1.3 -1.5 compare
phage P. simiae Grant Run MOI 0.1 -1.3 -1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 -2.2 compare
solid stress Fraxetin 2 mM; solid stress -1.3 -1.5 compare
stress methylglyoxal 0.032 vol% +1.4 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.5 +2.1 compare
soil soil sample 5; outgrowth in LB +1.6 +2.6 compare
stress Paraquat dichloride 0.002 mg/ml +1.9 +6.2 compare
stress Paraquat dichloride 0.008 mg/ml +2.9 +9.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +2.9 +1.9 compare