Fitness data for PS417_00885 in Pseudomonas simiae WCS417

integrase
SEED: Integrase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -0.3 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +2.1 compare
seeds Growth on radish seeds for 72 hours +0.3 +2.0 compare
soil soil sample 5; outgrowth in LB +0.4 +1.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +1.6 compare
supernatant control Vogels_fungal_media 0.1X +0.4 +2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +1.3 compare
phage JP1 MOI 1 +0.4 +2.1 compare
soil soil sample 7; outgrowth in LB +0.4 +1.2 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.4 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.2 compare
soil soil sample 4; outgrowth in LB +0.5 +1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.2 compare
soil soil sample 6; outgrowth in LB +0.5 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.2 compare
root root sample 6; outgrowth in LB +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.8 +1.7 compare