Fitness data for PS417_08920 in Pseudomonas simiae WCS417

branched-chain amino acid ABC transporter substrate-binding protein
SEED: Branched-chain amino acid transport system carrier protein
KEGG: branched-chain amino acid:cation transporter, LIVCS family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -3.1 compare
stress Thallium(I) acetate 0.0625 mg/ml -0.5 -3.5 compare
soil soil sample 2; outgrowth in LB -0.5 -2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -3.6 compare
stress methylglyoxal 0.032 vol% -0.5 -1.9 compare
motility outer cut, LB soft agar motility assay -0.5 -2.7 compare
solid stress Fraxetin 2 mM; solid stress -0.5 -2.9 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2 +0.5 +4.1 compare
stress Neomycin 0.04 mg/ml +0.5 +3.4 compare
root root sample 6; outgrowth in LB +0.5 +2.2 compare
carbon source Gly-Glu (C) +0.5 +3.1 compare
stress L-Lysine 60 mM +0.5 +3.4 compare
carbon source L-Histidine (C) +0.6 +3.6 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.6 +3.9 compare
carbon source L-Alanine (C) +0.9 +6.6 compare
carbon source L-Valine (C) +0.9 +3.1 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.0 +6.6 compare
carbon source L-Valine (C) +1.0 +4.1 compare
carbon source L-Alanine (C) +1.2 +7.8 compare