Fitness data for PS417_08860 in Pseudomonas simiae WCS417

small component of pyruvate transporter (yjcH-like) (from data)
Original annotation: membrane protein
SEED: Putative membrane protein, clustering with ActP

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source pyruvate (C) -1.8 -9.3 compare
carbon source pyruvate (C) -1.8 -8.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -1.8 compare
stress methylglyoxal 0.032 vol% -0.9 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.8 compare
motility inner cut, LB soft agar motility assay -0.8 -2.4 compare
liquid stress 80% Methanol 3 mM; liquid stress -0.8 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.8 compare
carbon source D-Galacturonic Acid (C) -0.7 -2.1 compare
carbon source Fumarate (C) -0.7 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.6 compare
soil soil sample 2; outgrowth in LB +0.8 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +3.1 compare
carbon source Gly-Glu (C) +0.9 +4.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.2 compare
soil soil sample 4; outgrowth in LB +1.0 +2.8 compare