Fitness data for PS417_08730 in Pseudomonas simiae WCS417

cytochrome C
SEED: Cytochrome c heme lyase subunit CcmH
KEGG: cytochrome c-type biogenesis protein CcmH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.6)


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group condition fitness t score  
motility inner cut, LB soft agar motility assay -3.0 -3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.7 -2.5 compare
seeds Growth on radish seeds for 72 hours -2.5 -1.9 compare
carbon source acetate (C) -2.5 -3.1 compare
soil soil sample 6; outgrowth in LB -2.4 -1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.3 -1.8 compare
soil soil sample 8; outgrowth in LB -2.3 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.2 -1.9 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -2.1 -2.8 compare
carbon source 2-Deoxy-D-Ribose (C) -2.1 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.0 -1.4 compare
carbon source Fumarate (C) -2.0 -3.2 compare
carbon source L-Valine (C) -1.9 -1.7 compare
seeds Growth on radish seeds for 72 hours -1.8 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.8 -1.5 compare
carbon source L-Leucine (C) -1.7 -3.2 compare
stress Choline chloride 300 mM -1.7 -2.2 compare
carbon source Gly-Glu (C) -1.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.6 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +4.1 +3.7 compare