Fitness data for PS417_08455 in Pseudomonas simiae WCS417

universal stress protein UspA
SEED: Universal stress protein family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
rhizosphere rhizosphere sample 1; outgrowth in LB -1.1 -4.7 compare
soil soil sample 5; outgrowth in LB -1.1 -3.7 compare
root root sample 6; outgrowth in LB -0.9 -2.5 compare
soil soil sample 8; outgrowth in LB -0.8 -2.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.8 -2.7 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.6 -1.8 compare
soil soil sample 4; outgrowth in LB -0.6 -2.4 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.6 -2.4 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.5 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.6 compare
ecofab LB in EcoFAB_3.5mL +0.5 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +3.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.2 compare
stress Gentamicin 0.008 mg/ml +0.6 +2.2 compare
stress Doxycycline hyclate 0.001 mg/ml +0.6 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +3.4 compare