Fitness data for PS417_08390 in Pseudomonas simiae WCS417

transcription elongation factor GreB
SEED: Transcription elongation factor GreB
KEGG: transcription elongation factor GreB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Valine (C) -0.9 -2.8 compare
carbon source 2-Deoxy-D-Ribose (C) -0.8 -5.5 compare
root root sample 6; outgrowth in LB -0.7 -2.8 compare
soil soil sample 5; outgrowth in LB -0.6 -1.8 compare
carbon source 2-Deoxy-D-Ribose (C) -0.6 -3.3 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.6 -3.0 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.5 -3.1 compare
soil soil sample 3; outgrowth in LB -0.5 -1.9 compare
carbon source L-Valine (C) -0.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -2.6 compare
soil soil sample 7; outgrowth in LB -0.5 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.6 compare
carbon source Trisodium citrate (C) +0.5 +3.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +2.7 compare
stress methylglyoxal 0.032 vol% +0.7 +2.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.7 +3.2 compare
stress Cobalt chloride 0.16 mM +0.7 +4.1 compare