Fitness data for PS417_08070 in Pseudomonas simiae WCS417

nickel ABC transporter permease
SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.7 compare
motility outer cut, LB soft agar motility assay -0.4 -2.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -2.1 compare
carbon source octanoate (C) -0.4 -1.9 compare
stress Paraquat dichloride 0.008 mg/ml -0.4 -1.9 compare
stress 6-methoxy-2(3H)-benzoxazolone 1.2 mM -0.4 -1.6 compare
liquid stress Fraxetin 3 mM; liquid stress -0.4 -2.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.4 -1.4 compare
carbon source L-Arabinose (C) -0.3 -2.3 compare
soil soil sample 6; outgrowth in LB +0.4 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
carbon source L-Valine (C) +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.0 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +2.2 compare
phage JP1 MOI 0.1 +0.6 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +3.1 compare