Fitness data for PS417_00770 in Pseudomonas simiae WCS417

autotransporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil soil sample 5; outgrowth in LB -0.8 -3.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.8 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.3 -1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.3 -1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +1.3 compare
ecofab LB in EcoFAB_3.5mL +0.3 +1.8 compare
carbon source L-Valine (C) +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.4 compare
nophagecontrol Only library +0.4 +1.9 compare
solid stress 80% Methanol 0.5 mM; solid stress +0.4 +1.9 compare
phage P. simiae Grant Run MOI 10 +0.4 +1.8 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) +0.4 +2.4 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.3 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.5 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.3 compare