Fitness data for PS417_07615 in Pseudomonas simiae WCS417

TetR family transcriptional regulator
SEED: Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.1)


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group condition fitness t score  
liquid stress Fraxetin 3 mM; liquid stress -4.0 -7.2 compare
liquid stress Fraxetin 3 mM; liquid stress -3.5 -8.4 compare
liquid stress Fraxetin 3 mM; liquid stress -3.1 -8.3 compare
carbon source 2-Deoxy-D-Ribose (C) -2.9 -7.4 compare
liquid stress Fraxetin 3 mM; liquid stress -2.8 -7.3 compare
solid stress Fraxetin 3 mM; solid stress -2.7 -5.1 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -2.6 -7.7 compare
carbon source 2-Deoxy-D-Ribose (C) -2.6 -7.5 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.5 -4.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.3 -5.5 compare
carbon source octanoate (C) -2.2 -6.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.2 -5.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.1 -4.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.1 -4.4 compare
solid stress Fraxetin 2 mM; solid stress -2.1 -7.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.1 +10.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.2 +10.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +2.5 +7.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.8 +13.7 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +4.0 +9.2 compare