Fitness data for PS417_07550 in Pseudomonas simiae WCS417

lytic transglycosylase
SEED: Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)
KEGG: soluble lytic murein transglycosylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress L-Lysine 60 mM -1.6 -6.0 compare
solid stress Fraxetin 3 mM; solid stress -1.6 -2.7 compare
solid stress Fraxetin 3 mM; solid stress -1.3 -7.1 compare
solid stress Fraxetin 3 mM; solid stress -1.3 -6.1 compare
solid stress Fraxetin 3 mM; solid stress -1.1 -5.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.3 compare
motility inner cut, LB soft agar motility assay -0.7 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.9 compare
solid stress Fraxetin 2 mM; solid stress -0.7 -3.7 compare
stress Choline Lysine 25 mM -0.7 -3.7 compare
solid stress Fraxetin 2 mM; solid stress -0.7 -3.4 compare
solid stress Fraxetin 2 mM; solid stress -0.6 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.0 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x -0.6 -3.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.0 compare