Fitness data for PS417_07385 in Pseudomonas simiae WCS417

2-hydroxyacid dehydrogenase
SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.7 -2.6 compare
stress Chloramphenicol 0.015 mg/ml -0.7 -4.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.1 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.6 -2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.3 compare
liquid stress Fraxetin 3 mM; liquid stress -0.6 -2.4 compare
phage P. simiae OR Antrim MOI 1 -0.6 -2.5 compare
phage P. simiae ORA MOI 1 -0.5 -1.9 compare
stress Gentamicin 0.008 mg/ml -0.5 -1.9 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.5 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.7 compare
stress Neomycin 0.04 mg/ml +0.5 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.8 +2.0 compare