Fitness data for PS417_07375 in Pseudomonas simiae WCS417

ribonuclease D
SEED: Ribonuclease D (EC 3.1.26.3)
KEGG: ribonuclease D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
root root sample 6; outgrowth in LB -1.5 -4.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.4 -4.1 compare
nitrogen source Uridine (N) -1.2 -6.3 compare
soil soil sample 4; outgrowth in LB -1.0 -3.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -3.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.8 -2.9 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.8 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -3.1 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -3.1 compare
carbon source Gly-Glu (C) -0.8 -3.8 compare
nitrogen source Cytidine (N) -0.7 -4.6 compare
soil soil sample 8; outgrowth in LB -0.7 -3.2 compare
solid stress Fraxetin 2 mM; solid stress -0.7 -3.9 compare
stress Doxycycline hyclate 0.001 mg/ml -0.7 -2.9 compare
nitrogen source Cytosine (N) -0.7 -4.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.9 +3.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.9 +4.0 compare
stress methylglyoxal 0.032 vol% +1.1 +4.4 compare