Fitness data for PS417_07325 in Pseudomonas simiae WCS417

AraC family transcriptional regulator
SEED: Transcriptional regulator PobR, AraC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.2 compare
phage JP1 MOI 0.1 -0.4 -1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.7 compare
carbon source L-Valine (C) +0.5 +1.6 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.5 +2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.2 compare
root root sample 6; outgrowth in LB +0.6 +2.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +3.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.8 +3.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.8 +4.3 compare