Fitness data for PS417_07200 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Cys regulon transcriptional activator CysB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress methylglyoxal 0.032 vol% -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.7 compare
phage P. simiae OR Antrim MOI 10 -0.4 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -1.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.4 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.4 -1.3 compare
stress Gentamicin 0.008 mg/ml -0.3 -1.4 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.3 -1.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -1.2 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.3 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.8 compare
supernatant control Vogels_fungal_media 0.1X +0.3 +1.3 compare
supernatant control Vogels_fungal_media 0.1X +0.3 +1.9 compare
soil soil sample 5; outgrowth in LB +0.4 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.2 compare
seeds Growth on radish seeds for 72 hours +0.5 +1.7 compare