Fitness data for PS417_07120 in Pseudomonas simiae WCS417

RNA polymerase sigma-H factor
SEED: RNA polymerase sigma-H factor AlgT
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
stress Polymyxin B sulfate 0.006 mg/ml -4.3 -11.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -3.9 -6.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -3.2 -6.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -3.1 -3.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -3.0 -6.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -2.6 -5.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.3 -5.4 compare
stress LB_noSalt with Chloride 1100 mM -2.3 -4.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -2.2 -6.2 compare
stress LB_noSalt with Chloride 1100 mM -2.1 -3.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -2.0 -3.5 compare
phage P. simiae Grant Run MOI 0.1 -1.9 -4.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.9 -3.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.7 -3.9 compare
phage P. simiae OR Antrim MOI 0.1 -1.6 -5.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.5 -6.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -1.5 -5.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.5 -3.6 compare
root root sample 6; outgrowth in LB +1.5 +6.5 compare
phage Wcs_1 +1.7 +6.3 compare