Fitness data for PS417_07090 in Pseudomonas simiae WCS417

histidine kinase
SEED: Tricarboxylate transport sensor protein TctE
KEGG: two-component system, OmpR family, sensor histidine kinase TctE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -2.6 compare
carbon source Gly-Glu (C) -0.5 -3.3 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -2.3 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.4 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.3 -1.8 compare
carbon source 2-Deoxy-D-Ribose (C) -0.3 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -2.2 compare
soil soil sample 6; outgrowth in LB -0.3 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.1 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 +3.1 compare
seeds Growth on radish seeds for 72 hours +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.5 compare
carbon source Trisodium citrate (C) +7.2 +40.9 compare
carbon source Trisodium citrate (C) +7.6 +50.5 compare