Fitness data for PS417_07075 in Pseudomonas simiae WCS417

tricarboxylic transport membrane protein
SEED: Tricarboxylate transport protein TctC
KEGG: putative tricarboxylic transport membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.3 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -1.2 compare
stress Gentamicin 0.008 mg/ml -0.7 -2.1 compare
phage P. simiae Grant Run MOI 10 -0.6 -1.6 compare
soil soil sample 7; outgrowth in LB -0.6 -1.3 compare
supernatant control Vogels_fungal_media 0.1X -0.6 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.5 compare
stress 6-methoxy-2(3H)-benzoxazolone 1.2 mM -0.6 -1.8 compare
supernatant control Vogels_fungal_media 0.1X -0.5 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.3 compare
stress Choline chloride 300 mM -0.5 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.4 compare
carbon source Trisodium citrate (C) +8.1 +46.0 compare
carbon source Trisodium citrate (C) +8.2 +52.2 compare