Fitness data for PS417_06705 in Pseudomonas simiae WCS417

3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) (from data)
Original annotation: 3-oxoadipate:succinyl-CoA transferase
SEED: 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6); Glutaconate CoA-transferase subunit B (EC 2.8.3.12)
KEGG: glutaconate CoA-transferase, subunit B

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Tryptophan (C) -3.2 -5.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.3 -4.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -3.6 compare
phage Wcs_1 -1.0 -2.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.0 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.4 compare
liquid stress Fraxetin 2 mM; liquid stress -0.8 -1.6 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.7 -1.3 compare
stress Doxycycline hyclate 0.001 mg/ml -0.7 -1.7 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.7 -2.0 compare
soil soil sample 2; outgrowth in LB -0.7 -1.8 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.7 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -1.7 compare
phage P. simiae ORA MOI 0.1 +0.7 +2.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.4 compare
phage JP1 MOI 1 +0.7 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.7 compare
phage P. simiae Grant Run MOI 0.1 +0.8 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.1 compare