Fitness data for PS417_00065 in Pseudomonas simiae WCS417

3-methyladenine DNA glycosylase
SEED: DNA-3-methyladenine glycosylase (EC 3.2.2.20)
KEGG: DNA-3-methyladenine glycosylase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
phage JP1 MOI 10 -2.7 -1.2 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -2.1 -1.8 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -2.0 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.0 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.6 -1.4 compare
phage P. simiae OR Antrim MOI 10 -1.5 -1.3 compare
phage P. simiae Grant Run MOI 10 -1.5 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.3 compare
motility outer cut, LB soft agar motility assay -1.3 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -1.2 compare
carbon source a-Ketoglutaric (C) -1.2 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.1 compare
stress Doxycycline hyclate 0.001 mg/ml -1.2 -1.3 compare
seeds Growth on radish seeds for 24 hours -1.2 -1.0 compare
carbon source D-Trehalose (C) +1.3 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +1.3 compare
carbon source L-Valine (C) +1.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +1.3 compare