Fitness data for PS417_06465 in Pseudomonas simiae WCS417

transcriptional regulator
SEED: Phosphate regulon transcriptional regulatory protein PhoB (SphR)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.2 -1.8 compare
carbon source L-Valine (C) -1.1 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -2.2 compare
motility inner cut, LB soft agar motility assay -1.1 -3.3 compare
soil soil sample 4; outgrowth in LB -0.9 -2.0 compare
soil soil sample 5; outgrowth in LB -0.9 -1.6 compare
carbon source 2-Deoxy-D-Ribose (C) -0.9 -3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.9 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.8 +2.9 compare
supernatant control Vogels_fungal_media 0.1X +0.9 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.9 +3.2 compare
stress methylglyoxal 0.032 vol% +1.0 +1.8 compare
phage P. simiae OR Antrim MOI 10 +1.1 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.6 +1.5 compare