Fitness data for PS417_06455 in Pseudomonas simiae WCS417

Fe(II)-dependent oxygenase
SEED: Iron-uptake factor PiuC
KEGG: PKHD-type hydroxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.8 -3.3 compare
phage P. simiae OR Antrim MOI 1 -1.2 -2.4 compare
solid stress Fraxetin 3 mM; solid stress -1.2 -1.9 compare
phage P. simiae ORA MOI 1 -1.2 -3.3 compare
soil soil sample 3; outgrowth in LB -1.1 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.2 compare
seeds Growth on radish seeds for 72 hours -1.0 -1.5 compare
soil soil sample 4; outgrowth in LB -0.9 -1.4 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -1.7 compare
carbon source Carbon source L-Ornithine 5 mM -0.8 -2.8 compare
motility inner cut, LB soft agar motility assay -0.8 -1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -1.7 compare
nophagecontrol Only library -0.7 -1.4 compare
liquid stress Scopoletin 2 mM; liquid stress -0.7 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.7 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.5 +2.1 compare
seeds Growth on radish seeds for 72 hours +1.5 +2.2 compare