Fitness data for PS417_00640 in Pseudomonas simiae WCS417

ABC transporter permease
SEED: Taurine transport system permease protein TauC
KEGG: sulfonate/nitrate/taurine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage JP1 MOI 10 -0.6 -2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -2.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.6 compare
soil soil sample 3; outgrowth in LB -0.5 -2.3 compare
phage P. simiae OR Antrim MOI 1 -0.4 -1.6 compare
carbon source D-Galacturonic Acid (C) -0.4 -1.9 compare
stress Neomycin 0.04 mg/ml -0.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
stress Thallium(I) acetate 0.0625 mg/ml -0.4 -2.3 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.4 -1.8 compare
nitrogen source Adenine (N) -0.3 -2.0 compare
seeds Growth on radish seeds for 24 hours -0.3 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.3 +0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.0 compare