Fitness data for PS417_06445 in Pseudomonas simiae WCS417

iron-siderophore ABC transporter permease
SEED: Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1)
KEGG: iron complex transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.6 -1.8 compare
seeds Growth on radish seeds for 72 hours -1.9 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -1.7 compare
carbon source Carbon source D-Mannitol 2.5 mM -1.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.6 -1.8 compare
stress Tetracycline 0.001 mg/ml -1.6 -3.2 compare
carbon source L-Leucine (C) -1.6 -2.3 compare
nitrogen source Putrescine (N) -1.5 -2.8 compare
phage P. simiae OR Antrim MOI 1 -1.5 -1.4 compare
liquid stress 80% Methanol 2 mM; liquid stress -1.4 -2.8 compare
stress methylglyoxal 0.032 vol% -1.4 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -1.2 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.4 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.1 +2.3 compare
carbon source L-Valine (C) +1.1 +1.9 compare
root root sample 6; outgrowth in LB +1.1 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.4 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.9 +3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.9 +2.5 compare