Fitness data for PS417_06395 in Pseudomonas simiae WCS417

amino acid transporter
SEED: Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)
KEGG: histidine transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
phage P. simiae Grant Run MOI 10 -2.0 -2.6 compare
stress Chloramphenicol 0.015 mg/ml -1.8 -3.7 compare
stress Tetracycline 0.001 mg/ml -1.3 -2.9 compare
seeds Growth on radish seeds for 72 hours -1.2 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.3 compare
stress Nalidixic 0.025 mg/ml -1.2 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.1 -1.7 compare
phage P. simiae OR1 MOI 0.1 -1.1 -1.5 compare
stress NaCl stress 250 mM -1.0 -2.7 compare
carbon source acetate (C) -1.0 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.2 compare
solid stress Fraxetin 2 mM; solid stress +1.0 +2.1 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.0 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.1 +2.2 compare
solid stress 80% Methanol 1 mM; solid stress +1.1 +3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +1.6 compare
root root sample 6; outgrowth in LB +1.2 +2.0 compare
solid stress 80% Methanol 2 mM; solid stress +1.2 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +1.2 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.6 +2.1 compare