Fitness data for PS417_06245 in Pseudomonas simiae WCS417

zinc metallopeptidase RseP
SEED: Membrane-associated zinc metalloprotease
KEGG: regulator of sigma E protease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.1)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -5.4 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.4 -2.3 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -4.2 -2.9 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -4.0 -2.8 compare
supernatant control Vogels_fungal_media 0.1X -4.0 -2.8 compare
stress Phosphomycin 0.003 mg/ml -3.9 -2.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -3.7 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.6 -2.4 compare
stress Polymyxin B sulfate 0.006 mg/ml -3.3 -2.9 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2 -3.2 -2.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -3.2 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -3.2 -2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -3.1 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -3.1 -2.5 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -3.1 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.1 -2.0 compare
phage P. simiae ORA MOI 0.1 -3.1 -1.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.1 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +3.3 +9.8 compare