Fitness data for PS417_06175 in Pseudomonas simiae WCS417

cysteine sulfinate desulfinase
SEED: Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA
KEGG: cysteine sulfinate desulfinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.0 -3.9 compare
carbon source L-Alanine (C) -1.8 -5.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.4 -3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -2.9 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.2 -3.0 compare
carbon source L-Alanine (C) -1.1 -5.7 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.1 -3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -3.4 compare
soil soil sample 2; outgrowth in LB -1.0 -2.6 compare
phage P. simiae OR Antrim MOI 1 -0.9 -2.8 compare
stress methylglyoxal 0.032 vol% -0.9 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.9 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +1.9 compare
stress Phosphomycin 0.001 mg/ml +1.1 +1.1 compare