Fitness data for PS417_06110 in Pseudomonas simiae WCS417

RND transporter
SEED: RND efflux membrane fusion protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage JP1 MOI 1 -0.9 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8 -2.1 compare
phage P. simiae OR Antrim MOI 10 -0.7 -2.1 compare
phage JP1 MOI 1 -0.7 -1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.9 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.6 -2.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -2.8 compare
motility inner cut, LB soft agar motility assay -0.6 -2.1 compare
phage JP1 MOI 10 -0.6 -2.0 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.6 -2.3 compare
supernatant control Vogels_fungal_media 0.1X -0.6 -2.1 compare
phage JP1 MOI 10 -0.6 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Phenylalanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -1.9 compare
root root sample 6; outgrowth in LB +0.6 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.6 compare
phage P. simiae OR1 MOI 0.1 +0.7 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.3 +2.4 compare