Fitness data for PS417_06090 in Pseudomonas simiae WCS417

extensin
SEED: extensin-like protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.8 compare
liquid stress 80% Methanol 1 mM; liquid stress -0.4 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.3 -1.5 compare
carbon source D-Glucosamine Hydrochloride (C) -0.3 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.2 compare
nophagecontrol TIme6-nophage +0.3 +1.5 compare
carbon source L-Valine (C) +0.3 +1.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.3 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.4 +1.9 compare
seeds Growth on radish seeds for 72 hours +0.4 +1.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 +2.0 compare
soil soil sample 5; outgrowth in LB +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.0 compare