Fitness data for PS417_06010 in Pseudomonas simiae WCS417

TetR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
phage JP1 MOI 10 -0.7 -2.2 compare
nophagecontrol Only library -0.6 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.8 compare
carbon source L-Valine (C) -0.5 -2.2 compare
phage JP1 MOI 10 -0.5 -2.0 compare
phage P. simiae OR Antrim MOI 10 -0.5 -1.7 compare
carbon source Carbon source D-Mannitol 10 mM -0.5 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +2.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.4 compare
carbon source Gly-Glu (C) +0.5 +3.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.6 compare
soil soil sample 4; outgrowth in LB +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.5 compare
carbon source Gly-Glu (C) +0.6 +4.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.7 compare