Fitness data for PS417_05925 in Pseudomonas simiae WCS417

spermidine/putrescine ABC transporter permease
SEED: Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -3.2 compare
phage JP1 MOI 1 -0.8 -1.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -1.4 compare
solid stress 80% Methanol 2 mM; solid stress -0.7 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.0 compare
carbon source L-Tryptophan (C) -0.6 -2.3 compare
carbon source NAG (C) -0.6 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.4 compare
seeds Growth on radish seeds for 72 hours +0.6 +1.6 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.6 +2.2 compare
carbon source Gly-Glu (C) +0.6 +2.2 compare
phage P. simiae OR Antrim MOI 0.1 +0.6 +2.5 compare
stress Benzalkonium Chloride 0.012 mg/ml +0.6 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.7 compare
phage P. simiae OR Antrim MOI 0.1 +0.8 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.5 compare