Fitness data for PS417_05880 in Pseudomonas simiae WCS417

ribosomal protein S12 methylthiotransferase
SEED: Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
KEGG: ribosomal protein S12 methylthiotransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -2.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.0 -3.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -3.0 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.7 -2.8 compare
soil soil sample 4; outgrowth in LB -0.7 -2.1 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.7 -2.4 compare
soil soil sample 5; outgrowth in LB -0.7 -2.3 compare
carbon source Carbon source L-Ornithine 10 mM -0.6 -3.0 compare
liquid stress Scopoletin 3 mM; liquid stress +0.6 +3.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
liquid stress Fraxetin 3 mM; liquid stress +0.7 +4.0 compare
phage JP1 MOI 10 +0.7 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.2 compare
nitrogen source Adenine (N) +0.9 +5.9 compare
liquid stress Fraxetin 3 mM; liquid stress +0.9 +4.1 compare
stress Gentamicin 0.008 mg/ml +1.0 +3.0 compare