Fitness data for PS417_05840 in Pseudomonas simiae WCS417

LuxR family transcriptional regulator
SEED: Transcriptional regulator, LuxR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
carbon source L-Valine (C) -3.3 -3.0 compare
carbon source octanoate (C) -3.1 -4.0 compare
carbon source octanoate (C) -2.7 -5.0 compare
carbon source L-Valine (C) -2.2 -2.8 compare
carbon source Gly-Glu (C) -1.9 -5.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.9 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -2.2 compare
carbon source Gly-Glu (C) -1.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.6 -1.8 compare
carbon source Ethanol (C) -1.5 -2.6 compare
carbon source acetate (C) -1.5 -3.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.5 -2.4 compare
carbon source Ethanol (C) -1.4 -2.7 compare
carbon source Carbon source L-Citrulline 5 mM -1.4 -3.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -1.7 compare
carbon source NAG (C) -1.3 -4.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -0.9 compare
carbon source Fumarate (C) -1.2 -3.9 compare
carbon source Carbon source D-Mannitol 10 mM -1.2 -2.6 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.2 +5.3 compare