Fitness data for PS417_05725 in Pseudomonas simiae WCS417

baseplate J protein
SEED: Baseplate assembly protein J

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.3 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.6 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.8 compare
soil soil sample 6; outgrowth in LB +0.5 +1.1 compare
phage P. simiae ORA MOI 0.1 +0.5 +1.6 compare
phage JP1 MOI 10 +0.5 +1.6 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +1.2 compare
soil soil sample 8; outgrowth in LB +0.6 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.8 compare
soil soil sample 4; outgrowth in LB +0.6 +1.1 compare
root root sample 6; outgrowth in LB +0.6 +1.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.7 +1.2 compare
soil soil sample 7; outgrowth in LB +0.8 +1.3 compare
stress Cisplatin 0.01 mg/ml +0.9 +4.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.0 +2.0 compare