Fitness data for PS417_05705 in Pseudomonas simiae WCS417

pyocin R2, holin
SEED: Holin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.1 compare
soil soil sample 7; outgrowth in LB -0.8 -2.2 compare
no phage control Time6-nophage -0.7 -2.7 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.7 -2.1 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.7 -3.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.2 compare
phage P. simiae ORA MOI 10 -0.6 -2.0 compare
carbon source L-Valine (C) -0.6 -1.8 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.6 -2.4 compare
carbon source RCH2_defined_glucose with MS_media 1x -0.6 -3.0 compare
seeds Growth on radish seeds for 72 hours -0.6 -1.6 compare
motility outer cut, LB soft agar motility assay +0.6 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +0.8 compare
solid stress Fraxetin 3 mM; solid stress +0.6 +2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.8 compare
solid stress Fraxetin 3 mM; solid stress +0.7 +2.4 compare
stress Cisplatin 0.01 mg/ml +1.0 +4.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.6 compare